Best Payroll Software for Small Businesses in Houston

May 1, 2024

Trusted brand review's Top Payroll Software Pick of  2022 in Huston: Onpay.

OnPay is the best software for companies with a small structure and a handful of employees 

The Best Payroll Software for Small Businesses in Houston of 2022: an Overview

Payroll software has become an integral part of all companies owing to how it accelerates the operating speed, giving you instant results. It allows you to automate tasks like drafting employee reports, calculating payroll, and more. However, when it comes to payroll software, the most difficult part might be figuring out how each one differs. 

Most compute salaries, provide direct deposit, and pay taxes, yet which is the best option for your company? Here, we have looked at hundreds of payroll software choices and chose the best solutions for small businesses based on cost, functionality, and ease of use – the attributes you should consider when choosing any payroll software. According to our research, OnPay and Paychex Flex are the two leading payroll software in Houston. 

Quick Picks: 


The Best Payroll Software For Small Businesses In Houston For 2022: In-Depth Review


Gusto: A cloud-hosted all-purpose Payroll solution

This software stands out among payroll services because it combines excellent payroll services with powerful HR software. Gusto can manage all of your payroll processing and payroll tax obligations, as well as all of your human resource requirements. The program is simple to use and comes with a variety of service plans. You can use it solely as payroll software or combine it with other HR software to create a complete HR solution.

 By providing full-service assistance for automatic payroll processing, tax filing, and payroll compliance, Gusto Payroll Services will streamline the payroll process and make handling payroll simple. Pay stubs and other tax documents are accessible to both employees and employers. From the start, Gusto assists firms of all sizes in finding health insurance and other employee benefits. You can give your staff the benefits they want and need to stay happy, healthy, and engaged with online enrollment and a team of professionals on call to assist them.

The contractor plan, Core plan, complete plan, and Concierge plan are the four pricing options offered by Gusto.

Click here for a detailed review of Gusto.

You will really like:

  •         Interface is pretty straightforward to use
  •         paperless and direct transactions
  •         Administers employee benefits
  •         payroll management processes are automated

You should look out for:

  •         Complicated tax calculations and deduction
  •         No international payroll features
  •         Difficulty signing documents


Visit Gusto


ADP:  A comprehensive payroll management system for businesses of all sizes

 ADP has dominated the payroll processing sector for decades and continues to be the market leader in terms of market share. RUN Powered by ADP is a digital payroll product made for small businesses with one to 49 employees supported by the company's 70+ years of expertise in payroll. ADP RUN has several great payroll features, as well as excellent customer service.

The Run platform offers 4 service plans, namely: Essential, Complete, Enhanced,  and HR Pro. The prices and features of these plans may vary, but they all include core payroll processes. This ensures that you can run payroll online, on the phone, or through the ADP app. On all the plans, ADP also files, calculates, and pays payroll taxes on behalf of you, as well as provides 1099 and W-2 forms at the year-end for employees.

Click here for a detailed review of ADP.

You will really like:

  •         The user interface is modern, simple, and easy to use.
  •         Access to a plethora of company resources and information on benefits
  •         The help icons are excellent refreshers.
  •         Employees may quickly sign up for benefits and use vacation days.
  •         The report writing choices available are excellent.

You should look out for:

  •         Extra charges aren’t disclosed properly
  •         Some menu items appear to be redundant.
  •         Background checks are clumsy and difficult to use.


Visit ADP


Paychex Flex: best for growing businesses that require flexible plans

Paychex Flex may not be the most affordable payroll system in the market of Huston, but it might be more useful if your company has employees in different states and is still expanding. It offers a variety of flexible programs that appeal to businesses of all sizes. You could handle payroll and provide insurance in all 50 states, which is a win since a lot of the competitor software presently only offer their service in around 30 to 40 states. 

Paychex also provides a Paychex Solo solution that is ideal for a sole proprietorship business in case you are only getting started.

Check out a detailed review of Paychex Flex here. 

You’ll really like:

  • Flexible plans 
  • Integrated Payroll and HR features 
  • Dedicated customer care service that is available 24 hours. 

You should look out for:

  • More features than ordinary small business needs 
  • More costly than local programs 
  • Premium plans have an additional setup fee 


Visit Paychex


OnPay: Best for businesses that use 943 file forms

OnPay distinguishes itself from competitors such as QuickBooks and Gusto by designing a business-friendly agricultural program to pay employees and submit taxes. It manages payments plus tax for H-2A visa employees and submits Form 943. It also enables you to run payroll as frequently as necessary and select numerous pay rates and payment schedules for individual employees. You may still submit standard payroll tax documents, such as Form 941, 1099, and W-2s, as well as withhold your employees' federal and state unemployment insurance repayments and other obligations. So, it is also handy for small businesses outside of agriculture.

Essentially, if your company is small and has a few employees, this is the perfect payroll solution for you.

Click here for a detailed review on OnPay. 

You’ll really like:

  • Files 943 forms which are rare. 
  • Multiple options to pay the employees with, such as direct deposit, checks as well as debit cards. 
  • Customizable payment rates and payment schedules for different employees. 

You should look out for:

  • Might face glitch on constant data upload on payroll 
  • Very few third-party integration options 
  • Poor customer service 


Visit Onpay


Patriot Software: best for self-service businesses

Patriot Software gives you a choice between full-service payroll and a more economical DIY version that costs only $10 per month plus $4 per employee per month if you file your own taxes. This is something none of the other companies on our list does. Both options include limitless payroll runs from any device, the ability to choose alternative payroll intervals, and the ability to customize hours, money, and deductions. 

Additionally, you have the option of paying your staff by direct deposit or physical checks. The full-service package lets you file and pay all federal, state, and local taxes regardless of where you live, and it comes with a penalty-free guarantee. 

You’ll really like:

  •       Very cost-efficient.
  •       You will have access to unlimited pay runs.
  •       Both online and mobile payroll processing.

You should look out for:

  •       The reporting system is limited
  •       The full-service package is the only one that allows you to file local, state, and federal taxes.


Visit Patriot


The Bottom Line: The Best Payroll Software For Small Businesses In Houston For 2022

Payroll software vary in design according to the set of customers they are catering to. By studying Huston's overall payroll software market in 2022, we have come up with the above-mentioned software to be the most useful contenders. Now, it is up to you to decide which design and features of the payroll software you should prioritize. We think OnPay is the better choice for small companies. 


Top 3 Payroll Services

Our Score
  • 1 month free trial
  • Trusted by over 200,000 businesses
  • All-in-one payroll and HR solution
  • Best for small businesses
  • “Autopilot” runs payroll itself
  • 6 months free with signup
  • Trusted by 850,000+ businesses
  • Dedicated customer service
  • Also offer HR and benefits management
  • 3 months FREE with signup
  • Trusted by 700,000 companies
  • Over 45 years of experience
  • All-in-one platform

What was covered on this page?

John Smithson

John Smithson

38, a small (but growing) business owner in the IT field.
I love to look for exciting and modern ways to keep my business ticking along, my employees happy, and most importantly, the business growing. I love researching the best software online to help me - and other businesses - achieve these goals.

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